BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C03SP1|AL428688
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1379 1693 0.0
>3x_Contig1379
Length = 6767
Score = 1693 bits (854), Expect = 0.0
Identities = 854/854 (100%)
Strand = Plus / Plus
Query: 1 gatcttcttctcaattgaaacggccatgttttccctccaatcttgaagttcctgttgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5233 gatcttcttctcaattgaaacggccatgttttccctccaatcttgaagttcctgttgtag 5292
Query: 61 aacaagactttccatagctcttttcaaaccttcaccttcattattcatcatatcctcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5293 aacaagactttccatagctcttttcaaaccttcaccttcattattcatcatatcctcagt 5352
Query: 121 tatagctttaatgtggggatacatcatagctctgttgatgaattcctcggcaatatgcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5353 tatagctttaatgtggggatacatcatagctctgttgatgaattcctcggcaatatgcgg 5412
Query: 181 atgagaagatactacagttttggcaaaatggagaagcttagagtcaaactcatcatgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5413 atgagaagatactacagttttggcaaaatggagaagcttagagtcaaactcatcatgttc 5472
Query: 241 ggggataacctcattagtattatctatgtcattgataggagggagagcttctttacctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5473 ggggataacctcattagtattatctatgtcattgataggagggagagcttctttacctgt 5532
Query: 301 tgtagactcagatacctgcttctgtttgctacttttaaattgttcgatttcgtgtttcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5533 tgtagactcagatacctgcttctgtttgctacttttaaattgttcgatttcgtgtttcca 5592
Query: 361 atccaaagcagtctgcgttttattatcactgttcggaatggtgtccatatttgaatcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5593 atccaaagcagtctgcgttttattatcactgttcggaatggtgtccatatttgaatcaac 5652
Query: 421 ttcttctttaccaaggaagtcaacttgatatgatttatccagccctatcgctccttctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5653 ttcttctttaccaaggaagtcaacttgatatgatttatccagccctatcgctccttctga 5712
Query: 481 aagacaatactttatggctgaatcttcgcttaatgaatcgaggaaatcatttgtacattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5713 aagacaatactttatggctgaatcttcgcttaatgaatcgaggaaatcatttgtacattc 5772
Query: 541 attttctgaagtgctagcatttttctctttcggaagtatgctagataaaaaggcattttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5773 attttctgaagtgctagcatttttctctttcggaagtatgctagataaaaaggcattttt 5832
Query: 601 attcgttgaatcattattatcgtcgttatcgttatgggcaaagttctcatgacaaatatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5833 attcgttgaatcattattatcgtcgttatcgttatgggcaaagttctcatgacaaatatt 5892
Query: 661 ggaatcctgtttgtccccatggtgacgcatatggtgatgtgtattattactaccattctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5893 ggaatcctgtttgtccccatggtgacgcatatggtgatgtgtattattactaccattctg 5952
Query: 721 atattcttttattagctttaagtggaactgtacaaaatctgtatctgaatcttcttccct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5953 atattcttttattagctttaagtggaactgtacaaaatctgtatctgaatcttcttccct 6012
Query: 781 tgcactatcgtaaagttcgcaatatatctgttcaatttcttgctctatattcaggttgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6013 tgcactatcgtaaagttcgcaatatatctgttcaatttcttgctctatattcaggttgtt 6072
Query: 841 atgacggccacaca 854
||||||||||||||
Sbjct: 6073 atgacggccacaca 6086
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7484
Number of Sequences: 1807
Number of extensions: 7484
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)